Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015857029.1_cds_XP_016513328.1_25883
CDS Infomation

[gene=LOC107830312] [db_xref=GeneID:107830312] [protein=cellulose synthase A catalytic subunit 8 [UDP-forming]-like] [protein_id=XP_016513328.1] [location=complement(join(9716..10303,10453..10806,10920..11119,11200..11446,11632..11844,11933..12058,12246..12383,12473..12818,12910..13176,13352..13499,13599..13650,13763..13848,13999..14179))] [gbkey=CDS]
Sequence

ATGATGGAGTCAGGGGTTCCGATATGTAACATTTGTGGCGAACAAGTGGGGTTAGCTAAT
TCCAATGGTGAAGTCTTTGTGGCTTGTCATGAGTGCAATTATCCTGTTTGTAAGTCTTGT
TTGCATTATGAGATCAAAGAAGGGCGCAATGCATGTTTACGCTGTGCAACTCCTTATAAT
GAGGGCTTGACAATGGCTGATGTAGAAAATGAGCATGAATCTTCTACTAACCATACTACA
ACGGCTTCTCATCTTAATACTGGTCAGGATGTTGGAGTTCATGCTAGAAATATCAGTACT
GTTTCAACTGTGGACAGTGAATATCATGATGACTCTGGGAATCCAATATGGAAGAATAGA
GTGGAAAGTTGGAAGGAAAAGAAAAACAAGAAAAAGAAGACCCAAAGTAAGACTGTTGCA
CAAGAAGCTGAAGTTCCACCTGAGCAGCAGATGGAAGAAAAGCCACAGTCAGCAGATGCT
GCAGAGCCACTTTCAAGAATCATTCCTGTACCGAAATCTCAAATTGCTCCATACAGAATC
GTGATTATCATCCGATTTATAGTTCTGTGCCTTTTCTTCCACTATAGAGTAACACATCCA
GTTGAAAGTGCCTATCCTCTGTGGCTTATTTCTGTTATTTGTGAGATCTGGTTCGCTTTC
TCTTGGGTGTTGGATCAGTTCCCTAAATGGTCTCCTATCAACCGAGAGACATATATTGAC
AGGCTATCTGCAAGGTTTGAAAGGGAGGGAGAACCTTGTCAGCTTGCGCCAGTGGATTTC
TTTGTCAGTACAGTTGATCCTATGAAAGAACCTCCTTTGATTACTGCCAACACAGTTCTC
TCAATCCTTGCAGTTGACTATCCTGTCGAGAAAGTTTCCTGCTATGTATCTGATGATGGT
GGCTCAATGCTTACATTTGAGTCACTAGCTGAGACTTCTGAATTTGCAAGGAAATGGGTA
CCATTCTGCAAGAAATTTTCAATTGAACCACGTGCACCTGAGTTCTACTTCTCGCAGAAG
TTTGATTACTTGAAAGACAAGGTGCAGCCTTCTTTTGTCAAGGAGCGCAGAGCAATGAAG
AGAGAATATGAAGAGTATAAAGTGAGGGTAAATGCTTTAGTTGCGAAGGCTCAGAAAACA
CCCGAGGATGGCTGGACCATGGCCGATGGAACTCCTTGGCCGGGAAACAACCCGCGTGAT
CATCCTGGAATGATTCAGGTTTTCTTGGGACATAGTGGTTCACATGACATTGAAGGAAAT
GAACTTCCACGACTCGTTTATGTCTCAAGAGAGAAAAGACCTGGTTATCAGCACCACAAA
AAAGCTGGTGCTGAAAATGCTCTGATAAGGGTGTCTGCAGTTCTCACAAATGCACCCTAC
ATTCTCAATCTTGACTGTGATCACTACGTCAATAACAGCAAAGCCATTCGTGAGGCTATG
TGTTTCCTAATGGATCCACAAGTTGGCAGAGACGTCTGTTATGTGCAGTTCCCTCAGAGA
TTTGATGGGATTGATAAAAGTGACAGATATGCTAACAGAAACATAGTCTTCTTTGATGTT
AACATGAAAGGTTTGGATGGCATCCAAGGACCTGTGTATGTCGGTACAGGATGTTGTTTC
AATAGGCAAGCACTTTATGGTTATAGTCCTTCTAACCTGCCTACATTACCCAAATCATCT
TCATCTTGTTCTTGCTGCTGTCGCCGCAAGAAACCAGCCAAAGAGAAGGATCTTACTGAG
GTATATCGTGAGGCAAAAAGAGAAGATCTAAATTCTGCAATCTTCAACCTAAGAGAAATT
GAAAATTATGACGAGCATGAGAGATCCTTGCTTATCTCTCAGATGAGTTTTGAGAAAACA
TTTGGCATGTCATCCGTGTTTATCGAGTCTACGTTGATGGAAAATGGAGGAGTACCTGAT
TCTGTCAATCCCTCGATACTGATTAGGGAAGCAATTCATGTTATCGGCTGTGGTTATGAG
GAGAAGACAGCATGGGGAAAAGAAATTGGTTGGATATATGGTTCAGTGACAGAAGATATC
TTGACTGGATTCAAGATGCAGTGCAGGGGATGGAGATCAATATACTGCATGCCATTGAGG
CCTGCTTTCAAAGGGTCAGCTCCTATCAACTTGTCAGACAGATTGCACCAAGTTCTTCGA
TGGGCTCTTGGATCGGTGGAGATTTTCTTGAGTAGGCATTGCCCTTTGTGGTATGGATTT
GGAGGCGGCCGCCTCAAATGGCTCCAAAGACTTGCCTACACCAACACCATTGTCTATCCT
TTCACTTCTCTTCCCCTCATTGCTTACTGTACTATTCCTGCTGTTTGCCTTCTTACAGGA
AAATTCATCATTCCTACGCTATCAAACGTTGCGAGTATACTGTTCCTTGGTCTTTTCCTT
TCCATTATAGTGACAGGTGTGCTCGAGCTACGATGGAGTGGTATAGGCATAGAGGACTGG
TGGCGTAACGAGCAGTTTTGGGTGATTGGAGGTGTCTCTGCCCATCTCTTTGCAGTTTTC
CAAGGATTCCTCAAAATGCTTGCCGGTATAGACACAAACTTCACGGTGACAGCCAAAGCT
GCAGATGATGGAGAGTTTGGCGATCTCTACATCTTCAAATGGACAACAGTCTTGATCCCT
CCAACCACAATTCTCATTCTTAACTTAGTTGGTGTTGTTGCTGGTTTCTCTGATGCACTC
AACAAAGGATATGAAGCTTGGGGGCCTTTATTTGGCAAAGTTTTCTTCTCATTTTGGGTG
ATCCTTCATCTTTATCCATTCCTCAAAGGTCTCATGGGACGCCAAAATCGAACACCAACC
ATTGTTGTGCTATGGTCTGTGCTCTTGGCTTCTGTTTTTTCACTTGTTTGGGTCAAGATT
AATCCATTTGTCTCCAAAGATGATCCTGCAGCTATGGCTCAAAACTGCATTTCCATTGAT
TGTTGA

Peptide Sequence

PEP ID

XP_016513328.1
PEP Infomation

PREDICTED: cellulose synthase A catalytic subunit 8 [UDP-forming]-like [Nicotiana tabacum]
Sequence

MMESGVPICNICGEQVGLANSNGEVFVACHECNYPVCKSCLHYEIKEGRNACLRCATPYN
EGLTMADVENEHESSTNHTTTASHLNTGQDVGVHARNISTVSTVDSEYHDDSGNPIWKNR
VESWKEKKNKKKKTQSKTVAQEAEVPPEQQMEEKPQSADAAEPLSRIIPVPKSQIAPYRI
VIIIRFIVLCLFFHYRVTHPVESAYPLWLISVICEIWFAFSWVLDQFPKWSPINRETYID
RLSARFEREGEPCQLAPVDFFVSTVDPMKEPPLITANTVLSILAVDYPVEKVSCYVSDDG
GSMLTFESLAETSEFARKWVPFCKKFSIEPRAPEFYFSQKFDYLKDKVQPSFVKERRAMK
REYEEYKVRVNALVAKAQKTPEDGWTMADGTPWPGNNPRDHPGMIQVFLGHSGSHDIEGN
ELPRLVYVSREKRPGYQHHKKAGAENALIRVSAVLTNAPYILNLDCDHYVNNSKAIREAM
CFLMDPQVGRDVCYVQFPQRFDGIDKSDRYANRNIVFFDVNMKGLDGIQGPVYVGTGCCF
NRQALYGYSPSNLPTLPKSSSSCSCCCRRKKPAKEKDLTEVYREAKREDLNSAIFNLREI
ENYDEHERSLLISQMSFEKTFGMSSVFIESTLMENGGVPDSVNPSILIREAIHVIGCGYE
EKTAWGKEIGWIYGSVTEDILTGFKMQCRGWRSIYCMPLRPAFKGSAPINLSDRLHQVLR
WALGSVEIFLSRHCPLWYGFGGGRLKWLQRLAYTNTIVYPFTSLPLIAYCTIPAVCLLTG
KFIIPTLSNVASILFLGLFLSIIVTGVLELRWSGIGIEDWWRNEQFWVIGGVSAHLFAVF
QGFLKMLAGIDTNFTVTAKAADDGEFGDLYIFKWTTVLIPPTTILILNLVGVVAGFSDAL
NKGYEAWGPLFGKVFFSFWVILHLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLVWVKI
NPFVSKDDPAAMAQNCISIDC

Transcript Sequence

Gene sequence data has not been registered.